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Award for Leelatian: AACR Brain Tumor Association Scholar in Training
Congratulations Nalin Leelatian on the AACR Brain Tumor Association Scholar in Training award for the work you presented at AACR 2017! Leelatian N, Sinnaeve J, Mobley BC, Mistry AM, Liu D, Weaver KD, Thompson RC, Chambless LB, Ihrie RA, Irish JM. Mass cytometry of human glioblastoma characterizes more than 99 percent of cells and reveals…
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Published: Leelatian et al., Current Protocols 2017
Congratulations to Nalin Leelatian and co-authors on this publication! Leelatian N, Doxie DB, Greenplate AR, Sinnaeve J, Ihrie RA*, Irish JM*. Preparing Viable Single Cells from Human Tissue and Tumors for Cytomic Analysis. Current Protocols in Molecular Biology 2017 Apr 3;118:25C.1.1-25C.1.23. PMC5518778. Pubmed. DOI. ► This peer-reviewed protocol for isolation and mass cytometry analysis of single cells…
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Video: Dr. Irish describes the lab
March 30, 2017: short video of Dr. Jonathan Irish describing the lab and research with views of the lab (and cameos of Allie, Nalin, & Caroline):
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Published: Diggins et al., Nature Methods 2017
Congratulations to Kirsten Diggins and co-authors! Diggins KE, Greenplate AR, Leelatian N, Wogsland CE, Irish JM. Characterizing cell subsets in heterogeneous tissues using marker enrichment modeling. Nature Methods PMC5330853. Pubmed. DOI. ► This peer-reviewed methods research followed Diggins et al., Methods 2015 and created a new algorithm for machine learning cell identity and coined the term…
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Published: Wogsland et al., Cytometry B 2017
Congratulations to Cara Wogsland and Kanutte Huse (corresponding) and co-authors on this publication! Wogsland CE, Greenplate AR, Kolstad A, Myklebust JH, Irish JM, Huse K. Mass Cytometry of Follicular Lymphoma Tumors Reveals Intrinsic Heterogeneity in Proteins Including HLA‐DR and a Deficit in Nonmalignant Plasmablast and Germinal Center B‐Cell Populations. Cytometry B 2017 Jan; 92(1):79-87. PMC5506779. Pubmed.…
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Webinar: Kirsten Diggins for Expert Cytometry (Excyte)
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PhD Defense: Congratulations Dr. Diggins!
Kirsten E. Diggins defended her Ph.D. thesis entitled Quantifying Cellular Heterogeneity in Cancer and the Microenvironment (PDF) in the Department of Cancer Biology at Vanderbilt University. Kirsten joined in May 2013 and defended in November 2011 and spent ~4.5 years in graduate school. Kirsten’s publications include first author papers in Methods, Nature Methods and many collaborative manuscripts. Congratulations!…
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Published: Leelatian and Doxie et al., Cytometry B 2017
Congratulations to Nalin Leelatian and Deon Doxie, co-first authors, and our collaborators on this publication! Updates: This manuscript was selected as the “Editor’s Best” by Cytometry B for 2016-2017! Congratulations! Nalin Leelatian has been invited to give a presentation on this work at the European Society for Clinical Cell Analysis (ESCCA) 2017 meeting in Thessaloniki, Greece in September…
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Published: Greenplate et al., Euro J Cancer 2016
Congratulations to Allison Greenplate and co-authors! Greenplate AR, Johnson DB, Ferrell PB, Irish JM. Systems immune monitoring in cancer therapy. European Journal of Cancer 2016. PMC4885747. Pubmed. DOI. ► This peer-reviewed review described the clinical cancer research advantages of combining systems immunology and human immune monitoring approaches using mass cytometry and machine learning. Figures from…
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Award for Diggins: Best Poster CYTO 2016!
Congratulations to Kirsten Diggins for her Best Poster at CYTO 2016! This work describing Marker Enrichment Modeling (MEM) went on to be published in Nature Methods in 2017.